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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THYM cis rs9815354 1 rs9825741 chr3:41761828 ULK4 chr3:41288091-42003660:- -0.96 -10.86 2.38E-18 Diastolic blood pressure
THYM cis rs9815354 1 rs9826058 chr3:41762062 ULK4 chr3:41288091-42003660:- 1.01 11.17 5.4E-19 Diastolic blood pressure
THYM cis rs9876781 1 rs9826195 chr3:48433635 TREX1 chr3:48501186-48509043:+ -0.28 -4.38 3.02E-5 Longevity
THYM cis rs10935120 1 rs9826496 chr3:134224437 ANAPC13 chr3:134196547-134204865:- 0.58 8.01 2.88E-12 Height
THYM cis rs10935120 1 rs9826496 chr3:134224437 CEP63 chr3:134204575-134293852:+ 0.41 6.04 2.93E-8 Height
THYM cis rs10935120 1 rs9827987 chr3:134272621 ANAPC13 chr3:134196547-134204865:- 0.58 8.05 2.33E-12 Height
THYM cis rs10935120 1 rs9827987 chr3:134272621 CEP63 chr3:134204575-134293852:+ 0.4 5.81 8.19E-8 Height
THYM cis rs9815354 1 rs9828398 chr3:41895893 ULK4 chr3:41288091-42003660:- 1.02 11.47 1.22E-19 Diastolic blood pressure
THYM cis rs10935120 1 rs9828815 chr3:134265749 ANAPC13 chr3:134196547-134204865:- 0.58 8.01 2.88E-12 Height
THYM cis rs10935120 1 rs9828815 chr3:134265749 CEP63 chr3:134204575-134293852:+ 0.41 6.04 2.93E-8 Height
THYM cis rs10935120 1 rs9829092 chr3:134229866 ANAPC13 chr3:134196547-134204865:- 0.59 8.13 1.58E-12 Height
THYM cis rs10935120 1 rs9829092 chr3:134229866 CEP63 chr3:134204575-134293852:+ 0.41 5.87 6.33E-8 Height
THYM cis rs9815354 1 rs9830064 chr3:41881801 ULK4 chr3:41288091-42003660:- 1.02 11.47 1.22E-19 Diastolic blood pressure
THYM cis rs9815354 1 rs9830469 chr3:41762535 ULK4 chr3:41288091-42003660:- 1.01 11.17 5.4E-19 Diastolic blood pressure
THYM cis rs10935120 1 rs9832785 chr3:134213070 ANAPC13 chr3:134196547-134204865:- 0.58 8.05 2.33E-12 Height